Chipbase 2.0
WebJul 17, 2024 · The CHIPS Alliance announced it released the Advanced Interface Bus (AIB) version 2.0 draft specification on GitHub. AIB standard is an open-source, royalty-free … WebThe current release of ChIPBase includes high-throughput sequencing data that were generated by 543 ChIP-Seq experiments in diverse tissues and cell lines from six …
Chipbase 2.0
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WebThe current release of ChIPBase includes high-throughput sequencing data that were generated by 543 ChIP-Seq experiments in diverse tissues and cell lines from six organisms. By analysing millions of TFBSs, we identified tens of thousands of TF-lncRNA and TF-miRNA regulatory relationships. WebChIPBase v3.0 identified ~151,187,000 regulatory relationships between ~171,600 genes and ~3,000 regulators by analyzing ~55,000 ChIP-seq datasets, which represent a 30 …
WebFor comments, suggestions on the ChIPBase database, please use the E-mail: [email protected] Please cite ChIPBase paper, Nucleic Acids Res. 2013; 41:D177 … WebNov 2, 2015 · XP. 1,516. Country. Nov 2, 2015. #1. Here's a re-upload of my Chipsune! 2.0 Which is what I think is the latest version (I stopped keeping track, and my files are a …
http://www.rnanut.net/lncrnadisease/index.php/home/search WebDec 16, 2024 · GEO (GSE31189, GSE87304, GSE13507, GSE31684, GSE124305), ChIPBase 2.0, and starBase 2.0 databases were used to predict the correlation between …
WebJan 4, 2024 · ChIPBase v2.0 consists of nine web-based modules and tools. The LncRNA, miRNA, OtherNcRNA, Protein and Regualtor modules are mainly developed to …
http://deepbase.sysu.edu.cn/chipbase/expression.php great wall ldvWebAn ensemble model of binary node interactions (valid for an abstract average cell) was derived from publicly available data. Transcription factor binding data was derived from ChIPBase 2.0 (Zhou et al., 2024), and … great wall latrobe menuWebJun 4, 2024 · Original ArticleH3K27 demethylase KDM6B aggravates ischemic brain injury through demethylation of IRF4 and Notch2-dependent SOX9 activation Lisha Chang,1 Zhaowang An,2 Jiang Zhang,1 Fuling Zhou,1 Dali Wang,1 Jian Liu,1 and Yunhe Zhang2 1The 2nd Department of Neurology, North China University of Science and … great wall latrobe lunch buffet timesWebMar 17, 2024 · A rapamycin analog containing an alkyne group (alk-rapa) was synthesized by a one-step reaction between rapamycin and 3-(but-3-yn-1-yl)-3-(2-iodoethyl)-3H-diazirine at room temperature overnight (Figures 1 A and S1 A).The azide-rhodamine or azide-biotin was reacted with alk-rapa by a copper-catalyzed azide-alkyne cycloaddition (CuAAC) … great wall latrobe paWebFeb 13, 2024 · Transcription factor binding data w as derived from ChIPBase 2.0 41, and information on other. known interactions w ere sourced from KEGG 42 and Reactome.org (see T able S1). Statistical analysis. florida grow festWebThe protein module on the Chipbase v.2.0 website displayed binding sites in both the upstream and downstream regions of IRF4 and Notch2 (Figure 4B). The co-expression … great wall lawyers aucklandWebDownload Table The library statistics of ChIP-seq datasets in ChIPBase v2.0 from publication: ChIPBase v2.0: Decoding transcriptional regulatory networks of non-coding RNAs and protein-coding ... florida grove apartments keasbey